Similarity analysis of protein sequences / Hanan Ahmed Mahran Mahmoud; Supervised Ali Ellakkani , Wael Elshemey

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Hanan Ahmed Mahran Mahmoud

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TextLanguage: English Publication details: Cairo : Hanan Ahmed Mahran Mahmoud , 2015Description: In various paging : charts ; 25cmOther title:

تحليل التشابه لتتابعات البروتين [Added title page title]

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Dissertation note: Thesis (M.Sc.) - Cairo University - Faculty of Science - Department of Biophysics Summary: A new 2D graphical representation of protein sequences is introduced. Twenty concentric evenly spaced circles divided by n radial lines into equal divisions are selected to represent any protein sequence of length n. An efficient numerical method based on the graph is proposed to measure the similarity between two protein sequences. The method is applied to ND5 proteins of nine different species and 24 transferrin sequences from vertebrates. High values of correlation coefficient between the results and the results of ClustalW are obtained (approximately perfect correlations)

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Item type	Current library	Home library	Call number	Copy number	Status	Barcode
Thesis	قاعة الرسائل الجامعية - الدور الاول	المكتبة المركزبة الجديدة - جامعة القاهرة	Cai01.12.04.M.Sc.2015.Ha.S (Browse shelf(Opens below))		Not for loan	01010110066432000
CD - Rom	مخـــزن الرســائل الجـــامعية - البدروم	المكتبة المركزبة الجديدة - جامعة القاهرة	Cai01.12.04.M.Sc.2015.Ha.S (Browse shelf(Opens below))	66432.CD	Not for loan	01020110066432000

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Thesis (M.Sc.) - Cairo University - Faculty of Science - Department of Biophysics

A new 2D graphical representation of protein sequences is introduced. Twenty concentric evenly spaced circles divided by n radial lines into equal divisions are selected to represent any protein sequence of length n. An efficient numerical method based on the graph is proposed to measure the similarity between two protein sequences. The method is applied to ND5 proteins of nine different species and 24 transferrin sequences from vertebrates. High values of correlation coefficient between the results and the results of ClustalW are obtained (approximately perfect correlations)

Issued also as CD

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