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Identification of protein-DNA binding sites using ChIP-seq data / Montasir Mohamed Mansour Ali ; Supervised Yasser Mostafa Kadah , Nahed Hussein Solouma

By: Contributor(s): Material type: TextTextLanguage: English Publication details: Cairo : Montasir Mohamed Mansour Ali , 2011Description: 88 P. : plans ; 30cmOther title:
  • تحديد أماكن ارتباط البروتين مع الحمض النووي باستخدام تقنية الترسيب المناعى للكروماتين مدمجة مع التسلسل النووي [Added title page title]
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Dissertation note: Thesis (M.Sc.) - Cairo University - Faculty of Engineering - Department of Systems and Biomedical Engineersing Summary: ChIP-Seq, which is chromatin immunoprecipitation (ChIP) followed by high-throughput sequencing, produces large amounts of data that can be used to map protein-DNA interactions in-vivo on a genome scale. In this thesis, we discuss ChIP-Seq technology and applied some algorithms of peak detection to ChIP-seq data to detect the protein-DNA binding sites and compare and discuss thier results. Also we explored protein-DNA binding using Matlab
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Item type Current library Home library Call number Copy number Status Date due Barcode
Thesis Thesis قاعة الرسائل الجامعية - الدور الاول المكتبة المركزبة الجديدة - جامعة القاهرة Cai01.13.03.M.Sc.2011.Mo.I (Browse shelf(Opens below)) Not for loan 01010110055882000
CD - Rom CD - Rom مخـــزن الرســائل الجـــامعية - البدروم المكتبة المركزبة الجديدة - جامعة القاهرة Cai01.13.03.M.Sc.2011.Mo.I (Browse shelf(Opens below)) 55882.CD Not for loan 01020110055882000

Thesis (M.Sc.) - Cairo University - Faculty of Engineering - Department of Systems and Biomedical Engineersing

ChIP-Seq, which is chromatin immunoprecipitation (ChIP) followed by high-throughput sequencing, produces large amounts of data that can be used to map protein-DNA interactions in-vivo on a genome scale. In this thesis, we discuss ChIP-Seq technology and applied some algorithms of peak detection to ChIP-seq data to detect the protein-DNA binding sites and compare and discuss thier results. Also we explored protein-DNA binding using Matlab

Issued also as CD

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