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008 171002s2017 ua dbh f m 000 0 eng d
040 _aEG-GiCUC
_beng
_cEG-GiCUC
041 0 _aeng
049 _aDeposite
097 _aPh.D
099 _aCai01.13.03.Ph.D.2017.Es.H
100 0 _aEsraa Mamdouh Hashim Shabeb
245 1 0 _aHigh-حerformance system for detecting novel altered regions of Hepatocellular carcinoma using high-throughput sequencing /
_cEsraa Mamdouh Hashim Shabeb ; Supervised Ayman M. Eldeib , Mai Mohamed S. Mabrouk
246 1 5 _aنظام عالي الأداء للكشف عن مناطق تغيرات جديده لسرطان الكبد الوبائي باستخدام تسلسل عالي الانتاجيه
260 _aCairo :
_bEsraa Mamdouh Hashim Shabeb ,
_c2017
300 _a91 P. :
_bcharts , maps, facsimiles ;
_c30cm
502 _aThesis (Ph.D.) - Cairo University - Faculty of Engineering - Department of Systems and Biomedical Engineering
520 _a Hepatocellular carcinoma(HCC) is a tumor of the liver which usually arises in the setting of chronic liver diseases. Fibrolamellar hepatocellular carcinoma (F- HCC) is a rare entity of HCC not yet analyzed cytogenetically. The use of high- performance parallel computing techniques can enable researchers to employ large numbers of processors to run comprehensive analyses within a reasonable period. This work provides a genomic study that focuses on using bioinformatics approaches to predict the molecular causes of HCC and F-HCC by the investigation whole genome sequence of the chromosomal aberrations using single nucleotide polymorphism (SNP)arrays and Next generation sequence (NGS) by applying four statistical techniques. The study revealed 3 distinct structural variations related genes MDM4, PRDM5, and WHSC1, these genes are a novel target signature that can help to predict survival of patients with detecting F-HCC. A new altered chromosome region amplification(4q22.1), this altered chromosomal region is novel for detect HCC, this finding has not previously reported being involved in liver carcinogenesis. NGS detect EPHA5, UBE1L2 tumor suppressor and UGT2B28 for both F-HCC and HCC
530 _aIssued also as CD
653 4 _aHepatocellular carcinoma
653 4 _aNext generation sequence
653 4 _aWhole-genome sequencing
700 0 _aAyman M. Eldeib ,
_eSupervisor
700 0 _aMai Mohamed S. Mabrouk ,
_eSupervisor
856 _uhttp://172.23.153.220/th.pdf
905 _aNazla
_eRevisor
905 _aShimaa
_eCataloger
942 _2ddc
_cTH
999 _c62688
_d62688