DNA sequence alignment using empirical substitution matrix / (Record no. 62918)
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| 000 -LEADER | |
|---|---|
| fixed length control field | 02767cam a2200325 a 4500 |
| 003 - CONTROL NUMBER IDENTIFIER | |
| control field | EG-GiCUC |
| 005 - DATE AND TIME OF LATEST TRANSACTION | |
| control field | 20250223031825.0 |
| 008 - FIXED-LENGTH DATA ELEMENTS--GENERAL INFORMATION | |
| fixed length control field | 171014s2017 ua h f m 000 0 eng d |
| 040 ## - CATALOGING SOURCE | |
| Original cataloging agency | EG-GiCUC |
| Language of cataloging | eng |
| Transcribing agency | EG-GiCUC |
| 041 0# - LANGUAGE CODE | |
| Language code of text/sound track or separate title | eng |
| 049 ## - LOCAL HOLDINGS (OCLC) | |
| Holding library | Deposite |
| 097 ## - Thesis Degree | |
| Thesis Level | M.Sc |
| 099 ## - LOCAL FREE-TEXT CALL NUMBER (OCLC) | |
| Classification number | Cai01.20.04.M.Sc.2017.Ze.D |
| 100 0# - MAIN ENTRY--PERSONAL NAME | |
| Personal name | Zeinab Adel Fareed |
| 245 10 - TITLE STATEMENT | |
| Title | DNA sequence alignment using empirical substitution matrix / |
| Statement of responsibility, etc. | Zeinab Adel Fareed ; Supervised Hoda M. O. Mokhtar |
| 246 15 - VARYING FORM OF TITLE | |
| Title proper/short title | محاذاة تسلسل الحمض النووى باستخدام مصفوفة التبديل التجريبية |
| 260 ## - PUBLICATION, DISTRIBUTION, ETC. | |
| Place of publication, distribution, etc. | Cairo : |
| Name of publisher, distributor, etc. | Zeinab Adel Fareed , |
| Date of publication, distribution, etc. | 2017 |
| 300 ## - PHYSICAL DESCRIPTION | |
| Extent | 77 Leaves : |
| Other physical details | facsimiles ; |
| Dimensions | 30cm |
| 502 ## - DISSERTATION NOTE | |
| Dissertation note | Thesis (M.Sc.) - Cairo University - Faculty of Computers and Information - Department of Information System |
| 520 ## - SUMMARY, ETC. | |
| Summary, etc. | The DNA{u2019}s linear structure is considered one of the most important points in sequence comparison in biology. The reason of using sequence comparison is to identify the functional, structural and evolutionary relationships between the DNA and proteins sequences. Sequence alignment allows researchers to {uFB01}nd the similar-ities and di{uFB00}erences among genetic sequences, such as DNA and proteins. It can be used in di{uFB00}erent {uFB01}elds like {uFB01}nding homology, exploring the origin of a sequence and identifying protein shape. Many algorithms were developed to perform this task and several hardware existing platforms are suitable for this purpose. Many methods can be used in sequence alignment, including dynamic programming and heuristic methods. The most interesting problem in sequence alignment is sequenc- ing long sequences, many algorithms have been developed to solve this problem using dynamic programming, heuristic methods and statistical methods. In this thesis, we introduce a new DNA-DNA global pairwise sequence alignment tech-nique for improving the accuracy of sequence alignment. The proposed approach uses a new scoring matrix to produce the alignment which is 3empirical codon substitution matrix3. This matrix can be used to discover new relationships be-tween sequences that couldn{u2019}t be discovered using the traditional matrices. Finally we present the experimental results that show the performance of our technique against to 3pairwise align codons3 and 3EMBOSS needle3. We compared the performance time and the alignment score among the three techniques |
| 530 ## - ADDITIONAL PHYSICAL FORM AVAILABLE NOTE | |
| Additional physical form available note | Issued also as CD |
| 653 #4 - INDEX TERM--UNCONTROLLED | |
| Uncontrolled term | DNA |
| 653 #4 - INDEX TERM--UNCONTROLLED | |
| Uncontrolled term | Pairwise alignment |
| 653 #4 - INDEX TERM--UNCONTROLLED | |
| Uncontrolled term | Sequence alignment |
| 700 0# - ADDED ENTRY--PERSONAL NAME | |
| Personal name | Hoda Mokhtar Omar Mokhtar , |
| Relator term | |
| 856 ## - ELECTRONIC LOCATION AND ACCESS | |
| Uniform Resource Identifier | <a href="http://172.23.153.220/th.pdf">http://172.23.153.220/th.pdf</a> |
| 905 ## - LOCAL DATA ELEMENT E, LDE (RLIN) | |
| Cataloger | Nazla |
| Reviser | Revisor |
| 905 ## - LOCAL DATA ELEMENT E, LDE (RLIN) | |
| Cataloger | Samia |
| Reviser | Cataloger |
| 942 ## - ADDED ENTRY ELEMENTS (KOHA) | |
| Source of classification or shelving scheme | Dewey Decimal Classification |
| Koha item type | Thesis |
| Source of classification or shelving scheme | Not for loan | Home library | Current library | Date acquired | Full call number | Barcode | Date last seen | Koha item type | Copy number |
|---|---|---|---|---|---|---|---|---|---|
| Dewey Decimal Classification | المكتبة المركزبة الجديدة - جامعة القاهرة | قاعة الرسائل الجامعية - الدور الاول | 11.02.2024 | Cai01.20.04.M.Sc.2017.Ze.D | 01010110073069000 | 22.09.2023 | Thesis | ||
| Dewey Decimal Classification | المكتبة المركزبة الجديدة - جامعة القاهرة | مخـــزن الرســائل الجـــامعية - البدروم | 11.02.2024 | Cai01.20.04.M.Sc.2017.Ze.D | 01020110073069000 | 22.09.2023 | CD - Rom | 73069.CD |