Efficient compression for DNA sequences using tree of files / Nour Saeed Ibrahim Bakr ; Supervised Amr Abdelrahman Sharawi
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TextLanguage: English Publication details: Cairo : Nour Saeed Ibrahim Bakr , 2018Description: 80 P. : charts , facsimiles ; 30cmOther title: - ضغط فعال لسلاسل الحمض النووى بإستخدام شجرة من الملفات [Added title page title]
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قاعة الرسائل الجامعية - الدور الاول | المكتبة المركزبة الجديدة - جامعة القاهرة | Cai01.13.03.Ph.D.2018.No.E (Browse shelf(Opens below)) | Not for loan | 01010110075434000 | ||
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مخـــزن الرســائل الجـــامعية - البدروم | المكتبة المركزبة الجديدة - جامعة القاهرة | Cai01.13.03.Ph.D.2018.No.E (Browse shelf(Opens below)) | 75434.CD | Not for loan | 01020110075434000 |
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Thesis (Ph.D.) - Cairo University - Faculty of Engineering - Department of Systems and Biomedical Engineering
Huge amounts of genomics data generated by modern DNA sequencers present non-easy challenges in storage and transmission. General purpose compression tools "GPCT" fails in these challenges. We present a novel method to improve the compression of GPCT. It consists of three pre-processing steps then applying GPCT. Validation results show improving the efficiency of gzip, Bzip2 and 7z by 6.59%, 7.12% and 5.69% respectively, with ten times faster than the best available methods
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